Search Results for "genetics" - Page 2
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Showing 69 open source projects for "genetics"
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SKUDONET ADC, operates at the application layer, efficiently distributing network load and application load across multiple servers. This not only enhances the performance of your application but also ensures that your web servers can handle more traffic seamlessly.
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LoanPro is a cloud-based loan servicing and management platform that is flexible, powerful, and reliable. LoanPro features include payment solutions, data management, customer communication, and reporting functionalities. LoanPro's data management features include verification tools, storage, and live amortization. LoanPro also allows users to create their own website that can accept online loan requests.
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MERAP
Medical Resequencing Analysis Pipeline
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Athus
Manage, merge, filter and convert population genetics data
This project assists you in performing population genetic analyses by taking over the ugly, boring and error-prone data manipulation steps. Starting from well specified input formats VCF, BED and FASTA and a unique configuration file describing data (f.e. from SNP-arrays or sequencing) as well as filtering one can create standard POPGEN formats like Eigenstrat, PEDMAP (PLINK), Treemix ... In addition there are several utilities for * generating VCF from SNPArray data (NCBI - GEO, Illumina... -
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coalescent
Software tool for Research in Computational Population Genetics
Development of exact and approximate methods (Importance Sampling and MCMC based) for computing likelihoods under the standard population genetic models of mutation,migration & recombination. Project issues are mainatined at https://freecode4susant.atlassian.net/browse/COALESCENT -
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VariantMaster
Extract causative variants for monogenic and sporadic genetic diseases
There is a fast growing interest in clinical genetics to the utilization of High Throughput Sequencing data for accurate diagnosis of monogenic diseases. To improve the identification of the variants from HTS, we developed VariantMaster, an original program that accurately and efficiently extracts causative variants in familial and sporadic genetic diseases. The algorithm takes into account predicted variants (SNPs and indels) in affected individuals or tumor samples and utilizes the row (BAM... -
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niGA
Heterogenous Multiprocessor Scheduling Using Genetic Algorithms
Implementation of task scheduling using Genetics algorithm for heterogeneous parallel programming -
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CDPOPgui
GUI Frontend for CDPOP
CDPOPgui is a GUI Frontend for CDPOP What is CDPOP? CDPOP (Cost Distance POPulations) is a spatially-explicit simulator of gene-flow in complex landscapes to explain observed population responses and provide a foundation for landscape genetics. The program implements individual-based population modeling with Mendelian inheritance on a resistant landscape. Simulation begins with an initial homogeneous population and followed by divergence through time as functions of individual based... -
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GenSim
A free chicken genetics simulator
Gensim is a free Mendelian genetics simulator based on the expression of genes in chickens. -
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OpenAIL
Open Artificial Intelligence Library
[Open Artificial Intelligence Library]. This library main goal is to provide a tool box to those who want to use algorithm such as neural network or genetics Algorithm and all algorithms that are commonly within the Artificial Intelligence field. -
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POPBAM is a tool to perform evolutionary or population-based analyses of next-generation sequencing data. POPBAM takes a BAM file as its input and can compute many widely used evolutionary genetics measures in sliding windows across a genome.
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With Tractivity's stakeholder management platform comes clarity from one system. Read more to find out how our cloud-based platform can help your stakeholder engagement and consultation projects. If improved stakeholder consultations and outcomes matter to your organisation, then we're here to help you engage, manage and deliver compelling insights and improved outcomes across your entire stakeholder landscape. When you engage with Tractivity you get access to the most up to date, relevant and practical tools to deliver impactful communications all from one system. Run successful engagement projects from start to finish with all the tools in one system. Our cloud-based platform helps you continually monitor your entire stakeholder landscape bringing the clarity you need. Our platform is designed to help you engage and capture every interaction. Tractivity gives you the tools to be creative, engaging, and to communicate your success.
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parastructure is a perl script collection to run the population genetics software STRUCTURE from Pritchard et al. 2000 (http://pritch.bsd.uchicago.edu/structure.html) in parallel on a cluster (beowulf type). Each run of K (the number of populations) is executed separately on each CPU of the cluster trough queue system based on PBS. A summary statistics table and distruct figures (Noah Rosenberg: http://www.stanford.edu/group/rosenberglab/distruct.html) are built at the end of the run. A patch...
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Bioinformatics Learning Tutorial
An interactive undergraduate biology tutorial
Interactive tutorials for undergrad genetics students illustrating DNA replication, transcription, and translation. Original color graphics and animations. * Source requires Qt libraries (http://qt-project.org/downloads) * Windows version @: http://www.cs.transy.edu/nsmith/BLT_Windows.zip -
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GenLab abbreviation of Genetics Laboratory .It is a user-friendly bioinformatics tool to support your bioinformatics lab work. GenLab creates a software user-friendly environment, which makes users to make a large number of protein, DNA, and RNA sequence analysis and excellent graphical viewing. It also provides powerful environment for simulations of Protein 3D molecular models. GenLab typically provides: •User-friendly graphical tools used for finding and working with relevant regions...
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dfe-alpha
Population genetics inference
Estimate distribution of fitness effects of new mutations. -
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The aim of project is to create simplified society simulator including virtual peaople relationships, genetics, needs, behavior etc.
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GeneNetwork is an open source bioinformatics software resource for systems genetics used to study gene networks that link sequence variants to differences in gene and protein expression and to differences in traits such as health and disease risk.
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Expediting cancer genetic and neurogenetic discovery through Bayesian Network Analysis of microarray data. Designed for genetics researchers, this takes in raw data (and a very small about of user input) and outputs reports usable by biologists.
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Assimilator is a molecular genetics tool to inform selection of associated genetic variants for functional studies
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IMPORTANT UPDATE! This project has migrated to https://github.com/polyworld/polyworld . This SourceForge repository is now obsolete. Polyworld is one of the earliest and most sophisticated artificial worlds developed to study Artificial Life and Artificial Intelligence, using computational genetics, physiology, metabolism, neural networks, learning, vision, and behavior.
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Ouroborus is an artificial life framework for mobile agents on a background of cellular automata. It can be used to teach and research topics such as population genetics, ecology and evolution. The demo includes a curses view and live Csound audio.
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Python library that simplifies the creation of a wide range of data management applications. Build scalable ETL (Extract, Transform, Load) applications quickly. Created at a genetics and molecular biology research laboratory.
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This project is using genetics algorithms to complete scheduling tasks such as timetables for elementary / high schools etc. Currently NetBeans project with no GUI and simple HTML export.
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AEvolution is an artificial life simulator, simulating (multi)cellular behavior using a genetics algorithm. Multiple planes can be connected via either local or ftp-based teleporters...
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Opensource software projects for genetics and genomics from Sage Bionetworks.
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Cattery Management is a pedigree, genetics and cattery management database for cat breeders. It is built in MS Access (Access 97 and above) by cat breeders and has a comprehensive list of features to track and manage all cattery activities.