Search Results for "throughput" - Page 19
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Showing 502 open source projects for "throughput"
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The system is designed for the automated analysis of high throughput sequencing data. At present Aped is focused on the analysis of data derived from Sanger and 454 sequencing. Additional functionality exists for SAGE and taxonomic profiling.
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Ray improves throughput when many concurrent queries access large scientific databases. Queries are synchronized to access sectors on disk simultaneously so that an arbitrary number of parallel queries can be executed without degradation in performance.
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ciperf is used to calculate the -b and -l values for iperf in order to produce a chosen udp packet throughput (overhead = 51 bytes) in respect to some variables which may change the calculation of the parameters (e.g. computers, links, ...).
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ArrayPipeLine is a web-based Laboratory Information Management system, using MySQL, Perl CGI and R. It enables high-throughput analysis of microarray data, providing automation of data handling, and rapid creation and implementation of analysis pipelines
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The High Throughput Sequence Analysis Pipeline uses freely available bioinformatics tools from NCBI, Phylip, EMBOSS and clustalw to identify and group closely related DNA samples. It can be run on *Nix systems linearly or in parallel using the SGE.
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FACT
Annotate & interpret your high-throughput experiment
The Functional Annotation and Correlation Tool allows the meta-analysis of data from high-throughput experiments (typically microarrays) by annotating (clones, genes, GeneOntology, location, etc.) and correlating data sets to identify important patterns. -
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Open Screening Environment is a open source system for management of High Throughput Screening related experiments. The platform consists of new research tools that will enhance significantly management and analysis of HTS data. More information can be f
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XAS is a software with graphical user interface to performan analysis of data generated by a high-throughput expression cloning technology using gene expression microarrays.
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wunkey (web monkey) is a Linux-based HTTP server written in C, designed to demonstrate modern advances in web server design. It permits scalability by adding cheap PCs, unfair scheduling for increased throughput, and fast serving of dynamic content.
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Holy Librams! is a World of Warcraft user interface addon that automates libram switching for healing paladins. It has both throughput and efficiency modes.
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ORFer reads the NCBI GenBank XML sequence format and extracts open reading frames for proteins. Sequences can be requested by GI or accession number. ORFprimer is an extended software package for high throughput PCR primer design for biological sequences
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FPGA based hardware card which implements above 4 giga bps network traffic throughput under affordable hardware cost. With linux driver and kernel patch, software based IPTables/netfilter firewall can be easily upgraded to a multi-giga high end firewall.
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XVMSocket is a Linux Kernel Module that provides a new socket family for high throughput (40-70 times better than TCP/IP sockets) between applications running on different guest Linux VMs on the same Xen system. No changes to Xen or Linux required.
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snmpcollector is a daemon/engine design for large-scale data collection via SNMP protocol. Uses a multi-threaded design to plan, control and distribute performance for optimum data collection throughput written in C. Uses database front- and back -end.
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Raindrop is a Java based framework based on SEDA (Staged Event Driven Architecture) principles. It focuses on providing highly concurrent server side throughput by managing and controlling Thread usage and concurrency primitives.
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This site is no longer updated, for updated info head over to http://opensource.iis.se/bbk (TPTEST is a software suite for testing network throughput and Internet services. It consists of a software library w. test functions that can be implemented i
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Low-level processor benchmark for x86 and amd64 processors: measures exact latency and throughput for each assembly instruction, and automatically finds execution units. Special focus on SIMD (MMX, SSE) instructions.
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Project MOVED to Codehaus New location is http://esper.codehaus.org The Esper project aims to provide a general-purpose event processing facility in Java for complex event processing of real-time, high throughput data streams.
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Tomahawk is a command line utility that supports high speeds bidirectional replay (300-750 Mbps) of saved tcpdump(8) files. Tomahawk is great for testing the throughput and blocking capabilities of network-based intrusion prevention systems (NIPS).
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wibro helpful system utilities. for example wibro-apc control AP system, wibro-npt test network throughput metric of TCP and UDP wibro-anal is for debugging or monitoring wibro inner module but some degree it is specific.
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BACMan is a Microsoft Access based application designed for the management and analysis of hybridization data related to the high throughput screening of large insert genomic libraries associated with physical mapping projects.
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Multispoof exploits weak authentication method based on IP-MAC pairs checking, implemented frequently in Ethernet networks by ISPs. This program allows to multiply user's throughput and serves as a demonstration of spoofing effectiveness.
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Library for fast and accurate timestamp generation; eliminating the need for a system call and reducing the chance of a context switch, making it ideal for high-throughput network applications.
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thrulay-ng is a network capacity tester based on thrulay 0.6. Features include the ability to test delay along with throughput using TCP and the ability to send fine-grained Poisson test streams using UDP.
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Io (ISREC ontologizer) is a program to classify high-throughput genomics data (e.g. microarray results) in the Gene Ontology. Io includes a statistical estimation of the significance of data in the GO nodes and reannotation files for Affymetrix chips.
