Search Results for "mapping data" - Page 17
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Showing 1057 open source projects for "mapping data"
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littletable is a lightweight in-memory data manager of collections of Python objects, providing ORM-like access for querying and joining data using object attributes as pseudo-columns.
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INTEGRATE: Calling gene fusions with exact fusion junctions and genomic breakpoints by combining RNA-Seq and WGS data. To download source code, reference manual and test case, please go to 'Files'. Also refer to 'Wiki' for details.
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PExFInS
Post-GWAS Explorer for Functional Indels and SNPs
The generation of Post-GWAS Explorer for Functional Indels and SNPs (PExFInS) was originated from the observation that high proportion of cis-acting expression quantiative trait loci (cis-eQTLs) emerged in GWAS SNPs and the underexplored status of indel cis-eQTLs for GWAS. We believe that the integration of cis-eQTLs, especially indel cis-eQTLs, with candidate disease-associated variants generated from GWAS could facilitate the identification of causal genes or disease mechanisms. On the... -
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ThéMA libs
Commons and utils Java classes used in ThéMA projects
This project contains 7 Java libraries developped in ThéMA laboratory : - common - data - parallel - drawshape - graph - network - msca -
Streamline Azure Security with Palo Alto Networks VM-SeriesImprove your security posture and reduce incident response time. Use the VM-Series to natively analyze Azure traffic and dynamically drive policy updates based on workload changes.
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pyEBSD-GUI
A free software to post-process EBSD data.
pyEBSD-GUI is a free software to post-process Electron Backscatter Diffraction (EBSD) data, inducing IPF mapping, image quality mapping, phase mapping etc, plotting pole figure, data segmentation, statistic analysis of the misorientation distribution etc. The software is written by python, and it supports both script and graphic user interface (GUI). pyEBSD V1.0 will be released soon. -
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NagVis is a visualization addon for the well known network managment system Nagios. NagVis can be used to visualize Nagios Data, e.g. to display IT processes like a mail system or a network infrastructure.
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base-adapter
Android's versatile Adapter for ListView, RecyclerView, GridView, etc.
base-adapter is a set of reusable Android adapter utilities that aim to reduce boilerplate when building list-based UIs such as ListView, GridView, and RecyclerView. It provides a generalized adapter pattern that streamlines view binding and recycling so developers can focus on data-to-view mapping rather than repetitive holder setup and switch statements. A key strength is support for multiple item view types, making it easier to build heterogeneous lists (for example, headers, content rows, and ads) without fragile conditional logic scattered across the codebase. The library typically uses a fluent or structured API to register item delegates and bind layouts consistently, which improves readability in large UI modules. ... -
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Pop Framework
Use Java bean as model of web page, reference beans in hyperlinks
Pop Framework (or Pop), http://www.popframework.net, is a bean-based MVC framework for Java/J2EE web applications. Pop implements IoC, Dependency Injection, and AOP. Pop provides annotations for users to define and reference a bean. Pop can help users to customize a bean, a scope, a factory and a reference in object-oriented way. Pop treats a bean as the model of a web page (JSP or servlet), the webpage itself is a view of the bean. The model provides the data for the view, the view is... -
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QAmiRSeq
A strand aware pipeline for accurate quantification of miRNAs/isomiRs
We designed and implemented a pipeline called QAmiRSeq for fast and accurate quantification of both known miRNAs and isomiRs from high throughput sequencing. QAmiRSeq reconciles its implementation with the unique nature of miRNAs. It is the first algorithm that takes advantage of the strand information for more accurate quantification. All analyses results are organized in a user friendly manner, accessible via a web interface, and can be drilled down interactively by investigators or... -
Build Agents and Models on One PlatformGemini Enterprise Agent Platform is Google Cloud's comprehensive platform for developers to build, scale, govern, and optimize agents and models. Choose from Google's most advanced models and third-party models like Anthropic's Claude Model Family.
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HORK
HORK v1.1 Object Relational Mapping (ORM) toolKit
...HORK only contains the features needed to move data to and from the database. Unlike other ORM's, HORK does not add features that replace things the database already can do. HORK is designed to be as fast as a custom Data Access Layer, and in most cases will be faster than available class serializers. HORK was also designed to be used on most operating systems. HORK is written in C#, and is compatible with .NET 4 or later and with MONO v.3 or later. -
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It gives facility of collecting tweets through Twitter Streaming API w.r.t different search criteria and to save tweets in CSV and ARFF (WEKA) file formats.
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GeoGig
Distributed Version Control System for Geospatial data
Welcome to the GeoGig project, exploring the use of distributed management of spatial data. GeoGig draws inspiration from Git, but adapts its core concepts to handle versioning of geospatial data. Users are able to import raw geospatial data (currently from Shapefiles, PostGIS or SpatiaLite) in to a repository where every change to the data is tracked. These changes can be viewed in a history, reverted to older versions, branched in to sandboxed areas, merged back in, and pushed to remote... -
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XASTIR
Multiplatform Ham Radio APRS and Mapping Program
NOTE: Code commits are FROZEN on SourceForge: New code is now at <http://github.com/Xastir/Xastir>. Real-time tracking & messaging of stations via radio/internet APRS data streams, w/125 map formats supported. Linux/FreeBSD/Solaris/MacOSX/Windows in any of 7 languages. Can also be used for mobile mapping w/GPS. MAILING LISTS ARE AT: PROJECT->WEB SITE. -
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forest01
Automatic delineation of forest borderlines
Forest01 is a tool for the automatic mapping of forest based on Airborne Laser Scanner data. The forest mapping is performed by means of quantitative criteria typical of forest definitions, namely minimum threshold for the height of trees, canopy cover, forest area size and width. -
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Rapid Inquiry Facility
A tool used to support environmental health studies.
The Rapid Inquiry Facility (RIF) is a freely available software application that supports two types of environmental health activities: disease mapping studies and risk analysis studies. It was designed to help epidemiologists and public health researchers to rapidly investigate potential environmental hazards, especially those related to industrial sites. The tool uses health, environmental, socioeconomic, population and geographic data to calculate risks in relation to sources of exposure and to generate maps. ... -
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Question Answering Corpus
Question answering dataset in "Teaching Machines to Read & Comprehend"
RC-Data is a dataset generation framework created by Google DeepMind to produce large-scale reading comprehension question-answer pairs from CNN and Daily Mail news articles. The dataset, introduced in the 2015 paper “Teaching Machines to Read and Comprehend” (Hermann et al., NIPS 2015), was among the first large corpora designed to train and evaluate machine reading and comprehension models. The repository provides scripts for downloading archived CNN and Daily Mail articles from the... -
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MIPVAR
MIP VARiant calling tool
A Java application to analyse Molecular Inversion Probe sequencing data within short time. Running the pipeline requires previous installation of three general tools: BWA, GATK and Bedtools. Input: For running the pipeline you need to specify 3 arguments. An example of the command is given below. The two input files are essential to specify the sample and run configuration. The environment argument should always be set to EMPTY. A brief description of other required files can be found... -
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Icarus Scene Engine
3D .NET engine for Windows, Linux, Mac
Icarus Scene Engine is a cross-platform, CLS-compliant 3D framework, integrating open source APIs into a cohesive all-open-source, all .NET solution. For Windows, MacOSX & Linux. Uses OpenTK, OpenGL, OpenAL APIs for graphics and audio. Runs on Mono/.NET. Links to FFMpeg for streaming video, and FreeType as a temporary conversion mod to bring fonts into a native XML format. Binary builds of Icarus will be infrequent, roughly every 18 months or so, the GIT code updates regularly on a... -
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Fielddata Mgr
Land survey field crew data management for .RAW and .JOB file types.
Fielddata Mgr Overview This is a Python program, which means that one must install the open source freely available Python interpreter and a few required also open source, freely available modules that support the functionality of the program. The program "Fielddata Mgr", is customized for the Rick survey department, in such that it supports up to 9 chiefs, each having their own folder in one location, 2 supervisers, each with a PC on the network, and access to a main... -
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Test Data Validator
Used to perform test data validations
This tool could be used to perform a wide variety of test data validations. It can compare heterogeneous sources of data on a field by field level basis based on a field mapping excel file and can provide results in an excel file. The file formats supported are csv, flatfiles, delimited files, xml, sap idocs etc -
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MutAid
MutAid: Sanger and NGS based pipeline for mutation screening.
MutAid: Sanger and NGS based integrated pipeline for mutation identification, validation and annotation in molecular diagnosis. MutAid is an integrated pipeline for mutation screening in clinical research. It can analyze Sanger sequencing and NGS data from raw reads to list of annotated mutation list. MutAid can analyze and interpret raw sequencing data produced by Sanger or several NGS sequencing platforms. It performs format conversion, base calling, quality trimming, filtering, read mapping, variant calling, variant annotation and co-analyze Sanger and NGS data under a single platform. ... -
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Visual NMS
Visual Network Management System
VisualNMS is a network management system with powerful visualisation features due to its vectorial based rendering (SVG). It is built using perl, javascript, SVG, HTML. It includes Layer 2 autodiscovery based on LLDP and other discovery protocols (Cisco's CDP, Extreme Networks' EDP, etc.). Other features include: real time SVG graphs on links, web2cli engine (AJAX to Telnet/CLI), editable maps, auto layout (based esentially on GraphViz), VLAN mapping (work in progress) based on SNMP. -
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MindEye
Neuromarketing software for marketing experiments
It is a free neuromarketing software to marketing experiments. It sync two neuro hardware. It works with EyeTribe (Eye tracking) and EEG (electroencephalogram)) MindWave of Neurosky C+ and .Net. Matlab -
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The CrisisGrid project develops Web Service compatible Geographical Information System services. We research problems in integrating both archival and real-time mapping, data, and information services with geophysical and geographical applications.
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olego
OLego – short or long RNA-seq read mapping to discover exon junction
...It is implemented in C++ with full support of multiple threading, to allow fast processing of large-scale data.
