Search Results for "genetic algorithm java" - Page 10
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Showing 907 open source projects for "genetic algorithm java"
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An easy-to-implement library that can assist Java developers in using the GeoHash algorithm in order to create geocodes based on custom latitude and longitude values. With the help of jGeohash, software developers will be able to quickly and easily generate a geohash code using user-defined latitude and longitude values. By using the GeoHash algorithm, the space can be divided into multiple grid shapes. This library is a basic implementation from the GeoHash algorithm written in the java...
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BONESA is an open source, user-friendly interface for tuning the numerical parameters of metaheuristics. This package includes a multi-objective parameter tuning algorithm and visualizations of the performance landscape.
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aprioriProcess
Apriori is designed to operate on databases containing transactions.
The Apriori Algorithm is an influential algorithm for mining frequent itemsets for boolean association rules. Key Concepts : • Frequent Itemsets: The sets of item which has minimum support (denoted by Li for i th -Itemset). • Apriori Property: Any subset of frequent itemset must be frequent. • Join Operation: To find Lk , a set of candidate k-itemsets is generated by joining Lk-1 with itself. -
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Grammatical Optimization
A java based framework for grammatical evolution.
This project is a result for my curiosity for how grammatical evolution (GE) works. Eventually, I made this wrapper for GE that should work with any numerical optimization algorithm. So the idea behind GE is that it takes production rules for computer programs using a context free grammar in Backus Naur form. The production rules can be used to evolve computer programs by running an algorithm such as a genetic algorithm or a particle swarm optimizer in the background. -
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Evolutionary Nursery
A simple genetic algorithm for numerical optimization
Evolutionary nursery is a result for my passion for developing genetic algorithms. I implemented this simple GA in 2008. This is especially intended for numerical optimization problems. -
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Enfomi
Encryption App
Enfomi is a cross-platform standalone password-based encryption/decryption program that supports 27 algorithm variants (including AES 256bit). Archives can be self-decrypting, thus making it perfect for mobile applications. -
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backdup
BackDup is a Duplicity front-end for MacOS and Linux
BackDup is a Duplicity (http://duplicity.nongnu.org/) front-end for MacOS and Linux written in Java. Duplicity creates bandwidth-efficient backup using the rsync algorithm. Mac OS users: please install Duplicity via macports (https://www.macports.org/) Linux users: install Duplicity via your package manager as usual. -
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JAS is a java library for creating agent based simulations. It features a discrete-event time engine, APIs for network simulation design, powerful yet easy-to-use implementations of Genetic Algorithms and Neural Networks.
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ProvErr
System Level Statistical Fault Diagnosis using Dependency Model
Code base moved to: https://github.com/Data-to-Insight-Center/ProvErr A statistical fault diagnosis tool that leverages an application's dependency model to automatically infer an o ending piece of software/system in event of failure -
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Evokit is an integrated environment for developing evolutionary computation algorithms. It is built around Java and the Eclipse platform, and will support several different libraries including ECJ.
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fastupload
The fastest form-based file upload java programming component
The component is based on RFC1867, written for java and j2ee development zone. It uses high performance byte-search algorithm to parse the submitted request, afterward save data into the file system. also, it provides a smart resolution to resolve the encoding issue for uploading text file. -
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MoccaCPU
Java based CPU stress testing tool
MoccaCPU is a CPU stress testing tool written in Java. It uses the Monte-Carlo-Algorithm to calculate approximate values of π (Pi) during the test. Mutiple threads can be started to use the full capacity of all given CPU cores. -
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PetriOpti
Petri network optimization with Martinez-Silva algorithm
A simply application in order to demonstrate Martinez-Silva optimization algorithm on Petri networks. -
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FamSeq
Variant calling on the basis of pedigree information
... implementations of the Mendelian genetic model: the Bayesian network algorithm, Elston-Stewart algorithm and Markov chain Monte Carlo algorithm. To make the software efficient and applicable to large families, we parallelized the Bayesian network algorithm that copes with pedigrees with inbreeding loops without losing calculation precision on an NVIDIA® graphics processing unit. -
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GenoCAD is a CAD software for synthetic biology. This application provides a web-based tool to design plasmids, artificial gene networks, and other synthetic genetic systems composed of standard genetic parts. It includes a parts management system, a rule-based design tool, and a simulation engine. This project has morphed into a SaaS model. The open source code is no longer maintained.
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A2y
Automated Algorithm Synthesis
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This project is an extended implementation of Knuth's "Dancing Links" algorithm and some use cases (e.g. Sudoku).
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evotopo
Evolving Realistic Topologies for Wireless Network Simulation
There is a need for realistic node topologies for simulating and testing wireless network protocols. The softare evoTopo is able to generate multiple different topologies based on a given reference example, typically from a real-world setup. Based on this an evolutionary algorithm evolves new topology files with equal parameters regarding node density, distribution homogeneity and network properties such as node degree distrbution. evoTopo can be used with any wireless network simulator... -
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SafePassDB
Protect your personal data with SafePassDB.
... Encryption Standard) algorithm, which is a standard by U.S. National Institute of Standards and Technology (NIST), for protecting your personal data. IMPORTANT: In order to run SafePassDB you need to have Java installed on your computer. Java is free and can be downloaded from - http://www.java.com/ -
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Mobile Device as GUI for Smart Objects
Mobile Device as GUI for Smart Objects
UNDERGRADUATE PROJECT UNDER DEVELOPMENT -- INSTABLE VERSION Android application that acts as GUI for embedded devices without user interface that are smart objects in a grid -
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VarImpact
Extracting effects of mutations on molecular properties from text.
Genetic variants alter cellular behavior in a variety of ways, changing biochemical properties of DNA, mRNA, and proteins. Many large-scale sequencing projects are under way to detect human variation in health and disease. Although broad disease associations can be discovered by GWAS studies, the low-level impact of mutations is hardly available in structured form. The results of thousands of small-scale experiments, on the other hand, are present in the literature and discuss observations made... -
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fusie
Fuzzy scala inference engine
Rewriting from Java to Scala and improving my university project on course Artifical Intelligence Systems. About project in russian: http://brunneng.blogspot.com/2013/06/fuzzy-scala-inference-engine-fusie.html Can be used from maven: <dependency> <groupId>net.sf.brunneng.fusie</groupId> <artifactId>fusie</artifactId> <version>0.8.1</version> </dependency> -
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phenotemp
phenological trends using NOAA AVHRR time series
Starting from GIMMS values as ascii data (each line will be treated as individual time series), the application can smooth the ts - values by applying different algorithm that are based on Fouriertransformation. Separation of seasonal figure as well as the detection of linear trends is possible. Possible breaks in longterm mean can be detected with a change-point analysis using CuSum algorithms. Phenological events such as start-of-season, day-of-max/day-of-min, end-of-season can be determined... -
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Athus
Manage, merge, filter and convert population genetics data
This project assists you in performing population genetic analyses by taking over the ugly, boring and error-prone data manipulation steps. Starting from well specified input formats VCF, BED and FASTA and a unique configuration file describing data (f.e. from SNP-arrays or sequencing) as well as filtering one can create standard POPGEN formats like Eigenstrat, PEDMAP (PLINK), Treemix ... In addition there are several utilities for * generating VCF from SNPArray data (NCBI - GEO, Illumina... -
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Machine learning library that performs several clustering algorithms (k-means, incremental k-means, DBSCAN, incremental DBSCAN, mitosis, incremental mitosis, mean shift and SHC) and performs several semi-supervised machine learning approaches (self-learning and co-training). --------------------------------------------------------------------------- To run the library, just double click on the jar file. Also, you can use the following command line: Java -Xms1500m -jar "ML Library.jar...
