wlangdon

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  • GP suggested optimisations

    bt2_io.cpp line 622 remove loop for(uint32_t i = 0; i < offsLenSampled; i++) it only invokes assert (many times) sa_rescomb.cpp line 50. for(size_t i = 0; i < satup_->offs.size(); i++) { The suggestion is simply to remove the loop which sets up needResolving. This works in some cases but perhaps more widely hints that this loop is expensive and is not being useful. How often...

    2013-01-21 13:51:24 PST in Bowtie

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  • 2012-11-28 (6 months ago)
  • 4067116
  • wlangdon (My Site)
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