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Sorry, my last comment turns out to be incorrect.
It looks like in all versions that I tested (b49, b50, b54), the eraser SOMETIMES works (when it's a term with no children, and therefore legal to delete) but sometimes fails (nothing happens), even when the term has no children and thus should be deletable.
2009-01-27 18:33:06 UTC in Gene Ontology
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This worked in b49, didn't work starting in b50.
2009-01-27 18:28:07 UTC in Gene Ontology
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As David concluded, this broke between b49 (worked) and b50. I traced the problem to the changes in TextEditor.java that were made between build 1811 and 1812. I'm not sure which changes were responsible. There are multiple changes between those builds, but most seem to be just formatting changes.
2009-01-27 17:40:23 UTC in Gene Ontology
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I just tried loading an ontology file with a missing quote, and the Read ontology panel showed this error message:
Load error, line 34 Expected ".
org.obo.dataadapter.OBOParseEngine.translateException(OBOParseEngine.java:1431)
org.obo.dataadapter.OBOParseEngine.translateAndThrow(OBOParseEngine.java:1423)
org.obo.dataadapter.OBOParseEngine.doParse(OBOParseEngine.java:396)
Can you...
2009-01-26 19:07:34 UTC in Gene Ontology
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What was the term filter you added? I just tried adding one (in b54) and it worked for me. You have to make sure it has the right logic (the right nested "matches all"), which is tricky--I did it wrong the first time and it didn't affect what was in the OTE.
2009-01-26 19:04:13 UTC in Gene Ontology
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This broke because the call to the help indexer (jhindexer) was commented out in build.xml:
Later there is the comment "". I'm not sure why it was concluded that it's not required anymore, and what was supposed to take its place, but if you want the...
2009-01-26 17:39:38 UTC in Gene Ontology
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This broke because the call to the help indexer (jhindexer) was commented out in build.xml:
Later there is the comment "". I'm not sure why it was concluded that it's not required anymore, and what was supposed to take its place, but if you want the...
2009-01-26 17:38:55 UTC in Gene Ontology
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Redundant with [ 1845251 ] save implied links is slow.
2008-11-11 18:06:00 UTC in Gene Ontology
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nomi committed revision 1906 to the Gene Ontology SVN repository, changing 1 files.
2008-11-10 17:16:11 UTC in Gene Ontology
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I'm sorry you lost some of your editing. I don't think it's all lost, though. As Amina mentioned, OBO-Edit2 (I assume you were using 2, not 1, though you didn't say) is set to autosave your work every 20 minutes by default (you can change that in the Configuration Manager). The autosave files are in the autosave subdirectory of your OBO-Edit configuration directory (refer to the Configuration...
2008-10-31 19:39:16 UTC in Gene Ontology
