After upgrading to Snow Leopard and then upgrading fink according to the directions on the fink website, I now have what appears to be a fully functional fink, but broken FinkCommander. fink list looks fine, but everytime I run Update Table on FinkCommander it logs the following to the console and leaves me with a blank package list:
8/30/09 10:36:29 AM...
2009-08-30 17:47:49 UTC in FinkCommander