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Open Biomedical Ontologies

Tracker: Plant Ontology (PO) TERM requests

5 Abaxial vs Adaxial - ID: 1896185
Last Update: Comment added ( pj37 )

Hi,

I have a request regarding PO:0000049: leaf lamina abaxial epidermis and
PO:0000050 leaf lamina adaxial epidermis.

Both of these terms have the same child terms: PO:0006504: lesf trichome,
PO:0000332: pavement cell, PO:0002000 stomatal complex.

I was wondering whether these child terms can be split by adding the term
abaxial or adaxial (e.g. abaxial stomatal complex, abaxial stomatal
complex) to distinguish the child terms.

Your feedback is appreciated.

Thanks,
Raymond DiDonato
BIOBASE Corporation


rdidonat ( rdidonat ) - 2008-02-18 15:02

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Nobody/Anonymous

Request: Existing term-related

monocot group

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Comments ( 3 )




Date: 2009-05-14 18:48
Sender: pj37Project Admin

PO group any suggestions?


Date: 2008-03-12 20:30
Sender: rdidonat


Hi Pankaj,

Thanks for your response.

PMID:11908517 describes phenotypic characteristics of the abaxial and
adaxial surfaces of the leaf sheath. In this case there are phenotypic
effects on both sides, but the authors do distinguish abaxial and adaxial
structures. I would also point out studies showing differential effects of
GA or ABA on adaxial vs abaxial structures (PMID: 8756507,PMID: 9847117),
suggesting an underlying, though perhaps subtle, difference in the sides. A
maize paper, while not speaking to the level of detail of stomata and
trichomes, does characterize a mutant showing defects specifically in
abaxial fate (PMID:17612519), in this case in relation to macrohairs and
smooth cell wall, suggesting that it might be useful to distinguish adaxial
and abaxial structures.

So, I can't necessarily point to a paper that necessarily shows an
expression difference between the two sides, but because the 11908517
discusses phenotypes of structures on both sides, we'd find the level of
detail useful.

Thanks!
Ray


Date: 2008-03-12 19:59
Sender: pj37Project Admin


We can add it but can you shed some light on how different is the gene
expression in the plant structures that are listed as children terms if
they are on the abaxial/adaxial side.


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