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Systems Biology Markup Language (SBML)

Tracker: MathSBML



Welcome to the issue reporting system for MathSBML

This is the public issue reporting system for MathSBML, a package for working with and simulating SBML models in Mathematica. Users are invited to report issues (such as problems, lack of clarity in the documentation, missing functionality, etc.) using this system for any version of MathSBML.

Click here to report a new MathSBML issue.

Reported issues are reviewed and evaluated by the MathSBML developers, then acted upon, and actions taken are logged with the reported issue in this system. Once actions on a given issue are concluded, the issue is marked as "closed" in this system, but it is never deleted and its record can always be accessed.



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ID Summary Status Opened Assignee Submitter Priority
ID Summary Status Opened Assignee Submitter Priority
Assignee: Status: Category: Group: Submitter: Keyword: Artifact ID: Permalink
2898621 Link to MathSBML file confusing Closed 2009-11-16 beshapiroProject Admin https://www.google.com/accounts 5
2308554 Events with time in trigger Closed 2008-11-18 nobody caroleproctor 5
2172919 RateRules involving species Open 2008-10-16 nobody sarahkeatingProject Admin 5
2162644 Identifying literals as variables Open 2008-10-13 nobody beshapiroProject Admin 5
2162635 double in unit multiplier - exponent not processed Open 2008-10-13 nobody beshapiroProject Admin 5
2028384 error executing run command with XCellerator Closed 2008-07-26 nobody tursem 5
2014380 ExpressionToSymbolicMathSBML Change Closed 2008-07-09 beshapiroProject Admin beshapiroProject Admin 9
1969185 Local parameter doesnt like large numbers Closed 2008-05-21 nobody sarahkeatingProject Admin 5
1956215 modifyParameter doesn't like tiny numbers Closed 2008-05-02 beshapiroProject Admin kailandifki 5
1955363 Problem with modifyParameter (Error: getEForm:...) Closed 2008-05-01 beshapiroProject Admin kailandifki 5
1949003 Initial assignment fails for a constant parameter Open 2008-04-22 nobody sarahkeatingProject Admin 5
1948100 Exponential in an event trigger incorrect Open 2008-04-21 nobody sarahkeatingProject Admin 5
1945134 Event delay using a functionDefinition fails Open 2008-04-17 nobody sarahkeatingProject Admin 5
1939525 MathSBML will not load Closed 2008-04-10 beshapiroProject Admin kailandifki 5
1898033 AssignmentRule for compartment fails Open 2008-02-20 beshapiroProject Admin sarahkeatingProject Admin 5
1897454 Parameter with value assigned fails Open 2008-02-20 nobody sarahkeatingProject Admin 5
1892076 Plot adds variables to models with events Closed 2008-02-12 beshapiroProject Admin sarahkeatingProject Admin 5
1891284 resetIC error Closed 2008-02-11 beshapiroProject Admin jamescclu 5
1889895 StoichiometryMath fails Closed 2008-02-08 beshapiroProject Admin sarahkeatingProject Admin 5
1889312 Creates modifier from local parameter shadowing species Open 2008-02-08 nobody sarahkeatingProject Admin 5
1887544 InitialAssignment fails Closed 2008-02-06 beshapiroProject Admin sarahkeatingProject Admin 5
1887542 L2V3 writes out units on a KineticLaw Closed 2008-02-06 beshapiroProject Admin sarahkeatingProject Admin 5
1839935 Unsized Compartments in SBML Level 1 Closed 2007-11-28 beshapiroProject Admin beshapiroProject Admin 5
1822207 E-Format in SBML L1 (MathSBML 2.5.9) Closed 2007-10-29 beshapiroProject Admin beshapiroProject Admin 5
1822183 Event/Assignment Rule Conflict not Flagged Open 2007-10-29 beshapiroProject Admin beshapiroProject Admin 5
1822178 Level 1 in MathSBML 2.7 SBMLNDSolve Closed 2007-10-29 beshapiroProject Admin beshapiroProject Admin 5
1822176 MathSBML Email Checking Closed 2007-10-29 beshapiroProject Admin beshapiroProject Admin 5
1778914 resetParameter - v2.666 - Mathematica 6 Closed 2007-08-21 beshapiroProject Admin beshapiroProject Admin 5
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