USeq

Just wanted to show an example:

Example output for "-b 1500" option chr10 374751 375342 0.0 204404 73 NM212479 chr10 170642 285200 + 170642 Closest 204404 73 NM006624 chr10 170642 290576 + 170642 Closest chr10 1300976 1301497 1.0 105529 594 NR015376 chr10 1195707 1200611 + 1195707 Closest chr10 2386896 2387760 2.0 617611 74 NM018702 chr10 1218072 1769717 - 1769717 Closest

If I'm looking at the right columns, these genes seem to have greater distances than 1,500bp (e.g. 204,404bp).