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Peak analysis without control

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  1. denizk

    2009-07-29 05:23:50 UTC
    Hi,
    I've been trying to generate a spreadsheet of ERs using the EnrichedRegionMaker tool like you mentioned in the last paragraph based on only the chIP data. I'm getting an error message that the control is required.
    The command I use is to retrieve the top100 regions:
    java -jar useq-4.2/Apps/EnrichedRegionMaker -t ./PointData -f ScanSeqsResults/windowData52bp.swi -n 100

    Error Message: Please provide control data.

    Wonder what I'm doing wrong, maybe someone can help me out here.

    Thanks,
    Deniz
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