TraceTuner Icon

TraceTuner

DNA sequencing quality values, base calling and trace processing

5.0 Stars (3)
3 Downloads (This Week)
Last Update:
Download tracetuner_3.0.6beta.tar.bz2
Browse All Files
Windows BSD Linux

Screenshots

Description

Tracetuner is a tool for base and quality calling of trace files from DNA sequencing instruments. Originally developed by Paracel, a Celera Business, this code base was released as open source in 2006. TraceTuner was used by Celera to call 30+ million reads from both Drosophila and human genome sequencing projects. In 2000, Applied Biosystems bundled TraceTuner with ABI3700 Genome Analyzers and shipped it to the customers of these capillary electrophoresis sequencers. Later versions of TraceTuner, which support mixed base calling, have been used by the research community, the private biotech sector, and the U.S. government as components of different variant detection, genotyping and forensic software applications (e.g. Applied Biosystems SeqScape, Paracel Genome Assembler, MTexpert, etc.).

TraceTuner Web Site

Categories

Bio-Informatics

Update Notifications





User Ratings

★★★★★
★★★★
★★★
★★
3
0
0
0
0
ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
design 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
support 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
Write a Review

User Reviews

There are no 1 star reviews.

Additional Project Details

Intended Audience

Science/Research

User Interface

Command-line, Java Swing

Programming Language

C, Java, Perl

Registered

2006-10-29
Screenshots can attract more users to your project.
Features can attract more users to your project.

Icons must be PNG, GIF, or JPEG and less than 1 MiB in size. They will be displayed as 48x48 images.