The Spinal Cord Toolbox is a comprehensive and open-source library of analysis tools for multi-parametric MRI of the spinal cord.
List of contributors can be found here: https://sourceforge.net/p/spinalcordtoolbox/wiki/Home/
- Spinal cord template
- Atlas of gray and white matter + spinal pathways
- Fast, robust and automatic segmentation of spinal cord
- Robust registration methods
- Miscellaneous tools dedicated to spinal cord
I installed the spinal cord toolbox on a Macbook running Mountain Lion and it works great. All of the packages installed and ran as expected. The segmentation, registration, and template / atlas functions work very well and are incredibly useful for creating masks that can be used for signal analysis. Well done. I look forward to using the rest of the package!