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SOAPdenovo-Trans

A de novo transcriptome assembler.

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BSD Linux

Description

SOAPdenovo-Trans is a de novo transcriptome assembler inherited from the SOAPdenovo2 framework, designed for assembling transcriptome with alternative splicing and different expression level. The assembler provides a more comprehensive way to construct the full-length transcript sets compare to SOAPdenovo2.

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Additional Project Details

Languages

Chinese (Simplified), Chinese (Traditional), English

Intended Audience

Advanced End Users, Developers

User Interface

Console/Terminal

Programming Language

C, C++

Registered

2013-05-13
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