SOAPdenovo-Trans Icon


A de novo transcriptome assembler.

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BSD Linux


SOAPdenovo-Trans is a de novo transcriptome assembler inherited from the SOAPdenovo2 framework, designed for assembling transcriptome with alternative splicing and different expression level. The assembler provides a more comprehensive way to construct the full-length transcript sets compare to SOAPdenovo2.

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Additional Project Details


Chinese (Simplified), Chinese (Traditional), English

Intended Audience

Advanced End Users, Developers

User Interface


Programming Language

C, C++


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