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SOAPdenovo2

Large-size genome de-novo assembler

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BSD Linux

Description

Latest Code on GitHub:
https://github.com/aquaskyline/SOAPdenovo2

SOAPdenovo is a novel short-read assembly method that can build a de novo draft assembly for human-sized genomes. The program is specially designed to assemble Illumina short reads. It creates new opportunities for building reference sequences and carrying out accurate analyses of unexplored genomes in a cost effective way. SOAPdenovo2 is the successor of SOAPdenovo. Cite the paper published in GigaScience (see website below) if you want to cite SOAPdenovo2.

SOAPdenovo2 Web Site

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User Reviews

  • tfileme
    1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    Soapdenovo2 works perfectly.

    Posted 05/20/2013
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Additional Project Details

Intended Audience

Science/Research, Developers

User Interface

Command-line

Programming Language

C++, C

Registered

2012-08-01

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