SIBsim4: an extensive rewrite of the sim4 program to improve execution speed and provide more informative output. Written in C, mainly targeted at Linux and Unix.Keywords: bioinformatics, genome, transcriptome, EST, splicing, exon, intron.
Be the first to post a text review of SIBsim4. Rate and review a project by clicking thumbs up or thumbs down in the right column.
2008-04-16 16:32 c4chris * sim4.init.c: Bump version number to 0.17. 2008-04-16 16:32 c4chris * SIBsim4.1: Add -H option. 2008-04-01 00:58 c4chris * align.c, sim4.h, sim4.init.c, sim4b1.c, sim4b1.h: Fix gcc 4.3 conversion warnings. 2008-03-31 00:58 c4chris * Makefile, sim4.h, sim4.init.c, sim4b1.c: Add -Wconversion and cleanup warnings. 2008-03-29 18:23 c4chris * sim4.h, sim4.init.c, sim4b1.c: Use percentage for -H chimera option. 2008-03-29 16:43 c4chris * sim4.init.c, sim4b1.c: Do chimera hunting in parallel with normal processing, and keep best result. 2008-03-29 02:26 c4chris * align.c, align.h, sim4.h, sim4.init.c, sim4b1.c: Implement chimera hunter.
2008-04-16 16:32 c4chris * sim4.init.c: Bump version number to 0.17. 2008-04-16 16:32 c4chris * SIBsim4.1: Add -H option. 2008-04-01 00:58 c4chris * align.c, sim4.h, sim4.init.c, sim4b1.c, sim4b1.h: Fix gcc 4.3 conversion warnings. 2008-03-31 00:58 c4chris * Makefile, sim4.h, sim4.init.c, sim4b1.c: Add -Wconversion and cleanup warnings. 2008-03-29 18:23 c4chris * sim4.h, sim4.init.c, sim4b1.c: Use percentage for -H chimera option. 2008-03-29 16:43 c4chris * sim4.init.c, sim4b1.c: Do chimera hunting in parallel with normal processing, and keep best result. 2008-03-29 02:26 c4chris * align.c, align.h, sim4.h, sim4.init.c, sim4b1.c: Implement chimera hunter.
Be the first person to add a text review.
Copyright © 2009 Geeknet, Inc. All rights reserved. Terms of Use
Thanks for your rating!
Would you also like to write a review?