Sequence Cleaner

Add a Review

Downloads: 0 This Week

Last Update: 2014-03-20

Download

Get an email when there's a new version of Sequence Cleaner

a script for automated trimming and validation of ESTs or other DNA sequences by screening for various contaminants, low quality and low-complexity sequences.

Project Activity

See All Activity >

Follow Sequence Cleaner

Sequence Cleaner Web Site

Other Useful Business Software

Error to trace to log to deploy. One click. No SSH.

Catch the cause before the pager goes off.

AppSignal links every error to the trace, the trace to the log, the log to the deploy that shipped it.

Free 30 days.

Rate This Project

User Reviews

Be the first to post a review of Sequence Cleaner!

Additional Project Details

Registered

2010-07-22

Report inappropriate content

$300 Free Credits to Build on Google Cloud

New to Google Cloud? Get $300 in credits to explore Compute Engine, BigQuery, Cloud Run, Gemini Enterprise Agent Platform, and more.

Start your next project with $300 in free Google Cloud credit. Spin up VMs, run containers, query petabytes in BigQuery, or build agents with Gemini Enterprise Agent Platform. Once your credits are used, keep building with 20+ always-free tier products including Compute Engine, Cloud Storage, GKE, and Cloud Run functions. No commitment required—just sign up and start building.

Claim $300 Free

Recommended Projects

Arapan Assembler
DNA Scissor is new software which provides users with a set of easy-to-use tools to perform several operations mainly: quality trimming, vector masking, vector-like contaminants removal, and repeats identification.
Lucy
Lucy is a program for DNA sequence quality trimming and vector removal. Its purpose is to process DNA sequence data acquired from DNA sequencers to prepare the data for downstream processing applications such as genome assembly.
skewer
A fast and sensitive adapter trimmer for illumina paired-end sequences
FastUniq
fastuniq
Bowtie
Bowtie, an ultrafast, memory-efficient short read aligner for short DNA sequences (reads) from next-gen sequencers. Please cite: Langmead B, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10:R25.