SAM tools

4.6 Stars (31)
1,867 Downloads (This Week)
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BSD Linux

Description

SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAM tools provide efficient utilities on manipulating alignments in the SAM format.

SAM tools Web Site

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User Reviews

  • kurioz
    1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    A core component of many a bioinformatics pipeline

    Posted 01/30/2014
  • bakerwm
    1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    Error: $./samtools: /lib64/libz.so.1: version `ZLIB_1.2.3.3' not found (required by ./samtools) How can I fix this problem? THX

    Posted 12/18/2013
  • diekhans
    1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    Brilliant idea, code is not robust. Doesn't check return status of malloc, other libraries. One shouldn't have to use gdb to understand an expected error.

    Posted 11/06/2013
  • saramills
    1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    Nice, thank you

    Posted 06/26/2013
  • hibiz
    1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    Wonderful project! Thanks for amazing work!

    Posted 04/07/2013
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Additional Project Details

Intended Audience

Developers, Science/Research

User Interface

Command-line, Curses/Ncurses

Programming Language

C, Perl

Registered

2008-11-25
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