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• RIPCAL RIPCAL_2.0 file released: ripcal2_install.zip

  ==================== 1.0.5 --> 2.0 ==================== added deripcal perl script, which predicts ancient pre-RIP alignment consensus sequence from fasta or clustalw format alignment input added ripcal_summarise perl script, which give basic RIP summary statistics from an input derived from a RIPCAL table output ==================== 1.0.4 --> 1.0.5 ==================== fixed errors causing user defined, fasta/clustal only inputs to fail to run added numbering of sequence id's in alignment based graphical outputs fixed bug introduced in v1.0.4 where alignment order either from pre-aligned or local clustalw generated inputs is lost in final output

  posted 151 days ago

• RIPCAL 2.0

  RIPCAL 2.0 has been released. This update includes the perl scripts deripcal (which can predict ancient pre-RIP sequence) and ripcal_summarise (which provides summary RIP statistics over a whole alignment).

  posted by acnfp_bioinf 151 days ago

• File released: /RIPCAL/RIPCAL_2.0/ripcal2_install.zip

  posted 151 days ago

• RIPCAL: v1.0.5

  MIN is an advanced unit/integration test framework for Linux/Maemo based devices. MIN can be integrated with standard toolchain in Linux (make). It makes testing easy, efficient and what is most important: rapid. RIPCAL v1.0.5 is now available for download. This update addresses a few bugs that prevented pre-aligned inputs from running properly. Also included in this update is a comprehensive explanation of the different analysis options and their outputs.

  posted by acnfp_bioinf 307 days ago

• RIPCAL: v1.0.3

  RIPCAL is a bioinformatics tool for the analysis of repeat-induced point mutation (RIP) of fungi. RIPCAL v1.0.3 has been released.

  posted by acnfp_bioinf 478 days ago

• Example Data RIPCAL example dataset 1 file released: ripcalexample1_0_2.zip

  posted 664 days ago

• File released: /Example Data/RIPCAL example dataset 1/ripcalexample1_0_2.zip

  posted 664 days ago