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QTL Macro for SAS Software Icon

QTL Macro for SAS Software

beta

by cherny, lessem


This is a SAS(r) Software macro package for performing multipoint QTL mapping using the DeFries-Fulker multiple regression approach to unselected and selected samples.


http://qms2.sourceforge.net





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Release Date:

2001-06-03

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Registered:

2000-08-02

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  • File released: /qms2 for Unix/1.00/qms2-1.00.tar.gz

    posted 3173 days ago

  • qms2 for Unix 1.00 file released: qms2-1.00.tar.gz

    1.00Added citation footnote. 0.10Added the Sham-Purcell modification of the Haseman-Elston model Double entry is not used for the Haseman-Elston basic and the Sham-Purcell model even if the data is double entered. This allows direct comparison of the DF, HE, and SP models from the same run. Set p to 1.0 for values of t from the wrong tail 0.09 Fix a bug that allowed individuals with missing phenotypes to be counted in the regressions. Updated the required citation in the documentation and license to be "in press" in Bioinformatics, instead of just a web citation. 0.08Documentation update. 0.07 Change as-is option to asis, and make it actually work. Include NOTES, ChangeLog, and How-To in distribution. Fix outdata bug and missing value bug. 0.06 The DF Augmented model now reports the t of interaction term. The beta of the interaction term is also reported. 0.05 The New Haseman-Elston model has been added. This model is (sib1 - mean(sib1))*(sib2 - mean(sib2)) = pihat. A typo that caused a bias in t was fixed. 0.04 This releases fixes a bug with the model degrees of freedom. Model DF now reflects the number of independent variables in the regression, which lets the script correctly compute the fit statistics for each model. 0.03 Completed features desired for first full release. Added plotting options to macro call. Added influence statistics. Added DeFries-Fulker Augmented model.

    posted 3174 days ago

  • File released: /qms2 for Unix/0.10/qms2-0.10.tar.gz

    posted 3232 days ago

  • qms2 for Unix 0.10 file released: qms2-0.10.tar.gz

    0.10Added the Sham-Purcell modification of the Haseman-Elston model Double entry is not used for the Haseman-Elston basic and the Sham-Purcell model even if the data is double entered. This allows direct comparison of the DF, HE, and SP models from the same run. Set p to 1.0 for values of t from the wrong tail 0.09 Fix a bug that allowed individuals with missing phenotypes to be counted in the regressions. Updated the required citation in the documentation and license to be "in press" in Bioinformatics, instead of just a web citation. 0.08Documentation update. 0.07 Change as-is option to asis, and make it actually work. Include NOTES, ChangeLog, and How-To in distribution. Fix outdata bug and missing value bug. 0.06 The DF Augmented model now reports the t of interaction term. The beta of the interaction term is also reported. 0.05 The New Haseman-Elston model has been added. This model is (sib1 - mean(sib1))*(sib2 - mean(sib2)) = pihat. A typo that caused a bias in t was fixed. 0.04 This releases fixes a bug with the model degrees of freedom. Model DF now reflects the number of independent variables in the regression, which lets the script correctly compute the fit statistics for each model. 0.03 Completed features desired for first full release. Added plotting options to macro call. Added influence statistics. Added DeFries-Fulker Augmented model.

    posted 3232 days ago

  • File released: /qms2 for Unix/0.09/qms2-0.09.tar.gz

    posted 3354 days ago

  • qms2 for Unix 0.09 file released: qms2-0.09.tar.gz

    0.09 Fix a bug that allowed individuals with missing phenotypes to be counted in the regressions. Updated the required citation in the documentation and license to be "in press" in Bioinformatics, instead of just a web citation. 0.08Documentation update. 0.07 Change as-is option to asis, and make it actually work. Include NOTES, ChangeLog, and How-To in distribution. Fix outdata bug and missing value bug. 0.06 The DF Augmented model now reports the t of interaction term. The beta of the interaction term is also reported. 0.05 The New Haseman-Elston model has been added. This model is (sib1 - mean(sib1))*(sib2 - mean(sib2)) = pihat. A typo that caused a bias in t was fixed. 0.04 This releases fixes a bug with the model degrees of freedom. Model DF now reflects the number of independent variables in the regression, which lets the script correctly compute the fit statistics for each model. 0.03 Completed features desired for first full release. Added plotting options to macro call. Added influence statistics. Added DeFries-Fulker Augmented model.

    posted 3354 days ago

  • File released: /qms2 for Unix/qms2-0.08.tar.gz/qms2-0.08.tar.gz

    posted 3389 days ago

  • qms2 for Unix qms2-0.08.tar.gz file released: qms2-0.08.tar.gz

    0.08 Documentation update. 0.07 Change as-is option to asis, and make it actually work. Include NOTES, ChangeLog, and How-To in distribution. Fix outdata bug and missing value bug. 0.06 The DF Augmented model now reports the t of interaction term. The beta of the interaction term is also reported. 0.05 The New Haseman-Elston model has been added. This model is (sib1 - mean(sib1))*(sib2 - mean(sib2)) = pihat. A typo that caused a bias in t was fixed. 0.04 This releases fixes a bug with the model degrees of freedom. Model DF now reflects the number of independent variables in the regression, which lets the script correctly compute the fit statistics for each model. 0.03 Completed features desired for first full release. Added plotting options to macro call. Added influence statistics. Added DeFries-Fulker Augmented model.

    posted 3390 days ago

  • File released: /qms2 for Windows/qms2-007.zip/qms2-007.zip

    posted 3423 days ago

  • qms2 for Windows qms2-007.zip file released: qms2-007.zip

    0.07 Change as-is option to asis, and make it actually work. Include NOTES, ChangeLog, and How-To in distribution. Fix outdata bug and missing value bug. 0.06 The DF Augmented model now reports the t of interaction term. The beta of the interaction term is also reported. 0.05 The New Haseman-Elston model has been added. This model is (sib1 - mean(sib1))*(sib2 - mean(sib2)) = pihat. A typo that caused a bias in t was fixed. 0.04 This releases fixes a bug with the model degrees of freedom. Model DF now reflects the number of independent variables in the regression, which lets the script correctly compute the fit statistics for each model. 0.03 Completed features desired for first full release. Added plotting options to macro call. Added influence statistics. Added DeFries-Fulker Augmented model.

    posted 3423 days ago

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