Py3DN

beta

Morphometric analysis and visualization of the 3D structure of neurons

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Description

Py3DN, is an open-source solution providing innovative tools to analyze 3D data collected with the widely used commercial system Neurolucida (MBF). It allows the construction of mathematical representations of neuronal topology, visualization and a variety of morphometric analysis on the neuronal structures. Above all, it provides a flexible environment where new types of analyses can be easily set up allowing total freedom to test new hypotheses. The application was developed in Python and uses Blender (an open source program) to produce detailed 3D representations of raw and processed data.
An article describing Py3DN is now accepted (May,2013) to Neuroinformatics journal.

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User Reviews

  • jamesperalta
    1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    Very useful. Thanks.

    Posted 06/08/2013
  • ianrichardson
    1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    merci beaucoup

    Posted 02/17/2013
  • jacksongomez
    1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    Fast and simple.

    Posted 01/23/2013
  • lukasford
    1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    Easy to install and use.

    Posted 12/22/2012
  • caydenellis
    1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    works great.

    Posted 11/02/2012
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Additional Project Details

Intended Audience

Science/Research

Programming Language

Python

Registered

2012-09-09
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