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picard-tools-1.61.zip 2012-01-30 32.9 MB 22 weekly downloads
README.txt 2012-01-30 584 Bytes 33 weekly downloads
Picard release 1.61 30 January 2012 - PicardException used to extend SAMException, which extended RuntimeException. Now PicardException extends RuntimeException directly. If you have code that catches SAMException, you may want to add a catch clause for PicardException if you use the net.sf.picard classes. If you only use classes in net.sf.samtools, you should never see PicardException thrown. - IlluminaDataProviderFactory.java: Ensure position data type is in set of data types in ctors rather than in makeDataProvider(), in order to avoid ConcurrentModificationException.
Source: README.txt, updated 2012-01-30