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picard-tools-1.55.zip 2011-10-24 31.7 MB 11 weekly downloads
README.txt 2011-10-24 617 Bytes 66 weekly downloads
Picard release 1.55 24 October 2011 - IoUtil.java: Fixed openFileForBufferedWriting() methods to vector through openFileForWriting methods which do the detection of .gz/.bz extensions and open up the appropriate compression output streams. - Implemented an option to allow for gzipping the output files from ExtractIlluminaBarcodes, and added a little bit of progress logging too. - Changes to introduce a SAMRecordFactory for use in SAMFileReader and related classes. Allows users of the picard/sam API to substitute a different factory that will create and return custom sub-classes of SAMRecord and BAMRecord.
Source: README.txt, updated 2011-10-24