EDNA

Energy Based Multiple Sequence Alignment (MSA) for Binding Sites

5.0 Stars (1)
2 Downloads (This Week)
Last Update:
Download EDNA1.3.1.zip
Browse All Files
Windows BSD Mac

Description

Multiple Sequence Alignment for Transcription Factor Binding Sites using Di nucleotides dependencies and relying on Free Interaction energies between neighbouring DNA bases to stabilise substitution energy of the alignment.

http://www.ncbi.nlm.nih.gov/pubmed/23990411

EDNA Web Site

Features

  • Java based multiple sequence alignment of binding sites

Update Notifications





User Ratings

★★★★★
★★★★
★★★
★★
1
0
0
0
0
ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
design 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
support 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
Write a Review

User Reviews

  • cammcdonald
    1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    msa-edna is fast and easy to use

    Posted 09/19/2012
Read more reviews

Additional Project Details

Intended Audience

Science/Research

Programming Language

Java

Registered

2012-05-09
Screenshots can attract more users to your project.
Features can attract more users to your project.

Icons must be PNG, GIF, or JPEG and less than 1 MiB in size. They will be displayed as 48x48 images.