Home
Name Modified Size InfoDownloads / Week
README 2011-05-13 3.5 kB
Rast2Systrip-1.0.4_Linux.tar.bz2 2011-05-13 8.2 MB
Totals: 2 Items   8.2 MB 0
				Rast2Systrip

 			       Bryan Hernandez

        More information about Rast2Systrip is available online at
           	 http://www.cbib.u-bordeaux2.fr/redmine/projects/Rast2Systrip

   ,----------------------------------------------------------------.
  | Table of contents                                               |
  | 1. Quick start                                                  |
  | 2. Licensing and distribution                                   |
  | 3. Acknowledgments                                              |
   `----------------------------------------------------------------'
         Date of last update to this file: 2011-05-11

================
=1. QUICK START=
================

Locate the pre-packaged Rast2Systrip.bin and run ./Rast2Systrip [options] [args] from the terminal.  Run ./Rast2Systrip -h for a complete list of options.
==================
1.1. Requirements
 (for source version.)
==================
  - Python = 2.6 with package python-dev
  - LibSBML – v5.0.0 with python option (http://sbml.org/Software/libSBML)
  
======================
1.2. Start Rast2Systrip
======================
This Rast2Systrip has been compiled for Linux.  
doc/html/index.html contains the doxygen-generated documentation for the program, and doc/refman.pdf contains the latex version of the same documentation.
Rast2Systrip has been compiled (inclluding all dependencies) with Pyinstaller.  No installation is necessary.  Simply run ./Rast2Systrip from the directory containing the .bin.  You can also run the program from the source code by running the same command from the src directory (but you will need the dependencies installed and available).

The complete list of commands is obtain by (running the .bin):

	./Rast2Systrip -h

===============================
=2. LICENSING AND DISTRIBUTION=
===============================
Licensing and Distribution Terms for Rast2Systrip:

Copyright (C) 2011 Bryan Hernandez from University of Bordeaux 2
                                                                            
Rast2Systrip is free software: you can redistribute it and/or modify          
it under the terms of the GNU Lesser General Public License as published by        
the Free Software Foundation, either version 3 of the License, or           
(at your option) any later version.                                         
                                                                            
Rast2Systrip is distributed in the hope that it will be useful,               
but WITHOUT ANY WARRANTY; without even the implied warranty of              
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the               
GNU General Public License for more details.                                
                                                                            
You should have received a copy of the GNU Lesser General Public License           
along with this program name "COPYING".  If not, see <http://www.gnu.org/licenses/>.

====================
=3. Acknowledgments= 
====================

This work is supported by the nice folks at the Centre Bioinformatique de Bordeaux, the Universitie de Bordeaux II, the Massachusetts Institute of Technology International Science and Technology Initiative, especially Macha Nikolski, Patricia Thebault, and Amine Ghozlane.

-----------------------------------------------
File author: B. Hernandez
Last Modified: $Date: 2011-05-11 $
Last Modified By: $Author: Hernandez $
-----------------------------------------------

Source: README, updated 2011-05-13