Molevolve is a Java library for running a Genetic Algorithm to model the 3-dimensional structures of peptide chains from amino-acid sequences. Client code can specify its own peptide chain model, fitness functions and GA operations. Requires JDK 1.5.
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1. Fixed serious bug in phi and psi angles in the default candidate structure. 2. Added hydrophobicity scoring function. 3. Added alpha-helix frequency scoring function.
No change in software. Just rearranging the documentation.
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