MIRA
Description
MIRA - Sequence assembler for whole genome shotgun and EST sequencing data. Can use Sanger, 454, Solexa (Illumina) and IonTorrent data. PacBio: CCS and ecCLR data usable, CLR not yet. Please visit http://sourceforge.net/apps/mediawiki/mira-assembler/
MIRA Web SiteFeatures
- Allows hybrid assemblies of Sanger, 454, Solexa, IonTorrent and PacBio (CCS & ecCLR) data
- Can use paired-end and / or unpaired data
- Supports ancillary data in TRACEINFO format (from NCBI)
- Marks places of interest with tags so that these can be found quickly in finishing programs
- Has a SNP analysis pipeline for sequencing data of viruses and procaryonts
User Ratings
User Reviews
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the best assembler so far
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it is not only the program which is spectacular, but also its author Mr.Chevreux is from outer space. you must definitely give a try.