MiModD

beta

Mutation Identification in Model Organism Genomes using Desktop PCs

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Description

MiModD is a software package for the analysis of next-generation sequencing (NGS) data with optimized usage of system resources and a user-friendly interface. For most model organism genomes it lets the user carry out a complete analysis from unaligned NGS read data to an annotated list of variants on a regular Desktop PC within a few hours. Its user-interface is beginner-friendly and designed to encourage geneticists to analyze NGS data themselves without the help of a trained bioinformatician.

MiModD Web Site

Features

  • WGS analysis of model organism genomes on single PCs
  • integration into an existing Galaxy installation with a single command
  • example datasets for testing
  • online tutorial and extensive documentation
  • platform-specific bundled distributions (Ubuntu, MacOS) to run and test in a pre-configured Galaxy instance without installation

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Additional Project Details

Intended Audience

Advanced End Users, Science/Research

Programming Language

Python

Registered

2013-10-19
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