The Metawatt binner is a graphical binning tool that makes use of multivariate statistics of tetranucleotide frequencies and interpolated Markov models. It also performs taxonomic assessment of binning quality (via BLAST). Created bins can be edited and exported as fasta. The Metawatt is implemented in Java SWING and depends on Blast, Glimmer and the Batik library for the export of SVG graphics.
Citation: Strous M, Kraft B, Bisdorf R, TegetMeyer H (2012) The binning of metagenomic contigs for microbial physiology of mixed cultures. Frontiers in Microbial Physiology and Metabolism 3:410. doi: 10.3389/fmicb.2012.00410
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