Screenshots
Description
Jmol/JSmol is a molecular viewer for three-dimensional chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read a multitude of file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other quantum chemistry programs. Files can be transferred directly from several databases, including RCSB, EDS, NCI, PubChem, and MaterialsProject. Multiple files can be loaded and investigated concurrently. A rich scripting language and a well-developed web API allow easy customization of the user interface. Features include interactive animation and linear morphing. Jmol interfaces well with JSpecView for spectroscopy, JSME for 2D->3D conversion, POV-Ray for images, and CAD programs for 3D printing (VRML export).
Features
- HTML5/canvas graphics
- Java applet, server-side Java, and stand-alone Java options
- Full crystallographic symmetry capability
- Create PNG and JPG images
- Easily customizable web-based interface
- Runs on all platforms, including mobile devices
- uses JQuery
- Reads many file formats, including PyMOL (PSE) session files
- Active, helpful, world-wide user group
Update Notifications
User Ratings
User Reviews
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Thanks for Jmol, it's wonderful!
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Thanks for great project! Simply the best.Good,good,good.+1
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very good project, thanks!Good,good,good.+1
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very good project, thanks!Good,good,good.+1
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Searches and displays molecules and proteins well. The cartoon and trace views are only for proteins. It'd be nice if you could zoom.