Comprehensively annotate your non-model species genome.

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BSD Linux


Uses an existing exonerate output or just predicted proteins (e.g. from Transdecoder or just a FASTA file) to prepare gene prediction inputs for Augustus, SNAP and geneid.
Exonerate is run (enabled via AAT) if it is not provided.
GTF file is produced to judge quality of annotation.
Sorts out high quality alignments from those that don't meet the criteria.

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Science/Research, Advanced End Users

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