JAligner is an open source Java implementation of the dynamic programming algorithm Smith-Waterman with Gotoh's improvement for biological local pairwise sequence alignment with the affine gap penalty model.
Browse Files for JAligner
| File/Folder Name | Platform | Size | Date ↓ | Downloads | Notes/Subscribe |
|---|---|---|---|---|---|
| Subdirectory (view all files) | |||||
| jaligner | 9.0 MB | 2005-05-05 | 10,682 | Subscribe Folder view | |
| 1.0 | 5.0 MB | 2005-05-05 | 7,918 | Subscribe Folder view | |
| jaligner_windows_1_0.exe | 1.5 MB | 2005-05-05 | 2,145 | Release Notes | |
| jaligner_unix_1_0.sh | 878.5 KB | 2005-05-05 | 190 | Release Notes | |
| jaligner_macos_1_0.sit | 915.4 KB | 2005-05-05 | 569 | Release Notes | |
| jaligner_linux_1_0.rpm | 630.6 KB | 2005-05-05 | 331 | Release Notes | |
| jaligner-1.0.zip | 707.6 KB | 2005-05-05 | 3,100 | Release Notes | |
| jaligner-1.0.tgz | 334.6 KB | 2005-05-05 | 1,583 | Release Notes | |
| 0.9 | 770.2 KB | 2004-12-21 | 577 | Subscribe Folder view | |
| jaligner-0.9.zip | 509.2 KB | 2004-12-21 | 340 | Release Notes | |
| jaligner-0.9.tgz | 261.0 KB | 2004-12-21 | 237 | Release Notes | |
| 0.8 | 706.9 KB | 2004-07-30 | 588 | Subscribe Folder view | |
| jaligner.zip | 443.9 KB | 2004-07-30 | 354 | Release Notes | |
| jaligner.tar.gz | 263.0 KB | 2004-07-30 | 234 | Release Notes | |
| 0.7 | 549.8 KB | 2004-03-28 | 478 | Subscribe Folder view | |
| jaligner-0.7.zip | 353.0 KB | 2004-03-28 | 278 | Release Notes | |
| jaligner-0.7.tar.gz | 196.8 KB | 2004-03-28 | 200 | Release Notes | |
| 0.6 | 549.7 KB | 2004-02-14 | 224 | Subscribe Folder view | |
| jaligner-0.6.zip | 353.0 KB | 2004-02-14 | 98 | Release Notes | |
| jaligner-0.6.tar.gz | 196.7 KB | 2004-02-14 | 126 | Release Notes | |
| 0.55 | 526.5 KB | 2003-09-25 | 259 | Subscribe Folder view | |
| jaligner-0.55.zip | 337.8 KB | 2003-09-25 | 128 | Release Notes | |
| jaligner-0.55.tar.gz | 188.7 KB | 2003-09-25 | 131 | Release Notes | |
| 0.5 | 197.6 KB | 2003-09-24 | 120 | Subscribe Folder view | |
| jaligner-0.5.tar.gz | 197.6 KB | 2003-09-24 | 120 | Release Notes | |
| 0.4 | 152.1 KB | 2003-09-10 | 103 | Subscribe Folder view | |
| jaligner-0.4.tar.gz | 152.1 KB | 2003-09-10 | 103 | Release Notes | |
| 0.3 | 121.6 KB | 2003-09-07 | 93 | Subscribe Folder view | |
| jaligner-0.3.tgz | 121.6 KB | 2003-09-07 | 93 | Release Notes | |
| 0.2 | 114.9 KB | 2003-09-03 | 94 | Subscribe Folder view | |
| jaligner-0.2.tar.gz | 114.9 KB | 2003-09-03 | 94 | ||
| 0.1 | 321.7 KB | 2003-08-25 | 228 | Subscribe Folder view | |
| jaligner-0.1.tar.gz | 116.5 KB | 2003-08-25 | 139 | ||
| jaligner-0.1.zip | 205.2 KB | 2003-08-25 | 89 | ||
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