GSP: genome size prediction software Icon

GSP: genome size prediction software

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Description

GSP program are based on Bayesian framework with an EM algorithm to predict genome size iteratively, which is elegant in mathematics. The model first develop under the no sequencing error model, then extend to the sequencing errors containing model.

GSP: genome size prediction software Web Site

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Features

  • fast calculate the K-mer frequency of the genome size
  • the EM iterative algorithm for the genome size predition
  • extra error model for real data

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User Reviews

  • akka9981
    1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    rename the GSP project to the smartGS

    Posted 11/28/2012
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Additional Project Details

Registered

2009-12-13
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