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GMOL

A tool for 3D genome structure visualization

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Description

GMOL is an application designed to visualize genome structure in 3D. It allows users to view the genome structure at multiple scales, including: global, chromosome, loci, fiber, nucleosome, and nucleotide. This software was built upon the pre-existing Jmol package.

GMOL Web Site

Features

  • Interactively visualize genome structures in 3D
  • Supports multiple scales/resolutions: global, chromosome, loci, fiber, nucleosome, nucleotide
  • Measure distances and angles between points in the structure
  • Rotate and scale models to analyze them even more
  • Select parts of the structure based on index, scale, or sequence information
  • Get DNA sequence for selected structures or portions of structures
  • Includes existing Jmol functions

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Additional Project Details

Intended Audience

Engineering, Science/Research

Programming Language

Java

Registered

2014-02-14
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