The DITA Open Toolkit is an implementation of the OASIS DITA XML Specification. The Toolkit transforms DITA content into many deliverable formats. See http://dita.xml.org/wiki/the-dita-open-toolkit for information about releases and download packages.
Web-based user interface for MAQ (Mapping and Assembly with Qualities), an Illumina / Solexa Deep Sequencing Reads (fastq format) mapping software. MAQGene classifies each found mutation based on its canonically predicted effect on the coding sequence.