CPFP provides a pipeline for the analysis of MS/MS proteomic data, targeted at the needs of central proteomics facilities.
Please view the project website at cpfp.sf.net for full details and access to a demonstration server.
Use the Discussion forums if you have queries about CPFP, or would like support from the developers.
- Web based proteomics pipeline targetted at needs of central proteomics facilities
- MS/MS Search with Mascot, X!Tandem, OMSSA in a single step
- Peptide and Protein validation using PeptideProphet & ProteinProphet
- Supports iTRAQ, SILAC, and SINQ Spectral Index label-free quantitation