COV2HTML Icon

COV2HTML

A visualization and analysis tool of Bacterial NGS data for Biologists

Add a Review
1 Download (This Week)
Last Update:
Download COV2HTML_PHP.zip
Browse All Files
Windows Mac Linux

Screenshots

Description

COV2HTML provides an easy and 'in home' web interface for biologists that allows coverage visualization of the NGS alignment needed for the analysis. It combines two essential processes: (i) MAP2COV, a tool that converts the huge NGS mapping or coverage files into light specific coverage files which contains genetic elements informations. (ii) COV2HTML, a visualization interface allowing a real-time analysis of data with selected criteria. Thus this interface offers a visualization of NGS mapping coverage data (DNA-seq, RNA-seq, ChIP-seq and TSS) performed in different prokaryotic organisms (bacteria, viruses...) or different experimental conditions (mutant versus wild type strains or different growth states…) facilitating studies.

COV2HTML Web Site

Features

  • ncRNA feature analysis
  • X and Y Zooms are supported
  • Security enhanced: HTTPS as default
  • Performance enhanced
  • Now works correctly with pair-end reads aligned with Bowtie

Update Notifications





Write a Review

User Reviews

Be the first to post a review of COV2HTML!

Additional Project Details

Intended Audience

Science/Research

User Interface

Project is a user interface (UI) system, Tk

Programming Language

PHP, Python

Registered

2012-04-24
Screenshots can attract more users to your project.
Features can attract more users to your project.

Icons must be PNG, GIF, or JPEG and less than 1 MiB in size. They will be displayed as 48x48 images.