Mix

Mix is a tool to combine multiple assemblies from NGS data.

Add a Review
1 Download (This Week)
Last Update:

Screenshots

Description

Mix is a tool that combines two or more draft assemblies, without relying on a reference genome and has the goal to reduce contig fragmentation and thus speed-up genome finishing. The proposed algorithm builds an extension graph where vertices represent extremities of contigs and edges represent existing alignments between these extremities. These alignment edges are used for contig extension. The resulting output assembly corresponds to a path in the extension graph that maximizes the cumulative contig length.

Please note that Mix has moved to: https://github.com/massyah/MIX

Mix Web Site

Categories

Bio-Informatics

License

MIT License

KEEP ME UPDATED

Write a Review

User Reviews

Be the first to post a review of Mix!

Additional Project Details

Intended Audience

Science/Research

Programming Language

Python

Registered

2012-06-19
Screenshots can attract more users to your project.
Features can attract more users to your project.

Icons must be PNG, GIF, or JPEG and less than 1 MiB in size. They will be displayed as 48x48 images.