BioUtils Perl Library

A collection of Perl modules for handling fasta/q sequences and files.

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BioUtils are a collection of Perl modules for DNA sequence analysis in bioinformatics. BioUtils is a significantly faster and more memory efficient alternative to BioPerl. However, it's functionality is currently limited to the features listed below.

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  • Store FASTA/Q sequences (including quality values)
  • Read/write FASTA/Q files
  • Perform simple quality control on FASTA/Q sequences
  • Provide summary info for a set of FASTA/Q sequences
  • Build a simple consensus sequences from 2 or more FASTQ sequences

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