BioCompUP Align

Add a Review
1 Download (This Week)
Last Update:
Download Library docs generated by doxygen
Browse All Files

Description

C++ library for protein sequence profile to profile alignment. Implementing numerous known alignment variants in a flexible and manageable architecture.

BioCompUP Align Web Site

Features

  • Make sequence to sequence alignment
  • Make profile to sequence alignment
  • Make profile to profile alignment
  • Use three different weighting schemes in the construction of profiles
  • Use eleven different scoring functions used in alignments against profile Profile
  • Use structural information of various kinds
  • Use of penalty functions for linear gap
  • Perform global, local and semi-global alignments

Update Notifications





Write a Review

User Reviews

Be the first to post a review of BioCompUP Align!

Additional Project Details

Languages

English

Intended Audience

Science/Research

User Interface

Console/Terminal

Programming Language

C++

Registered

2010-10-04
Screenshots can attract more users to your project.
Features can attract more users to your project.

Icons must be PNG, GIF, or JPEG and less than 1 MiB in size. They will be displayed as 48x48 images.