MView

Extract and reformat a sequence database search or multiple alignment

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Description

NOTE: The MView repository and web pages have moved to:

https://github.com/desmid/mview

https://desmid.github.io/mview/

Release tarballs will continue to be uploaded to SourceForge.

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MView is a command line utility that extracts and reformats the results of a sequence database search or a multiple alignment, optionally adding HTML markup for web page layout. It can also be used as a filter to extract and convert searches or alignments to common formats.

Inputs:
- Sequence database search: BLAST, FASTA suites.
- Multiple sequence alignment: CLUSTAL, HSSP, MSF, FASTA, PIR, MAF.

Outputs:
- HTML, FASTA, CLUSTAL, MSF, PIR, RDB (tab-separated).

Found a bug? Please email biomview@gmail.com

MView Web Site

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Additional Project Details

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

Perl

Registered

2005-11-25