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#167 ace2ca.pl

terminator
closed
5
2011-06-15
2011-05-17
seqBio
No

9-terminator has option createACE=1, it uses the ace2ca.pl script. I wanted to double check if it is still maintained. I may have heard at some point that it wasn't?

Thanks!

Discussion

  • Jason Miller

    Jason Miller - 2011-06-01
    • status: open --> pending
     
  • Jason Miller

    Jason Miller - 2011-06-01

    The runCA on-line documentation says the ACE options is known to be buggy. Indeed, though the option generates an ACE file, the ACE file is rejected by consed in some cases. We plan to fix the problem with our CA 7 release. We strongly recommend that, while you use CA 6, you should rely on the ASM, FASTA, and POSMAP output files rather than the ACE.

     
  • Jason Miller

    Jason Miller - 2011-06-01
    • labels: --> Distribution Flawed
    • milestone: --> terminator
    • assigned_to: nobody --> jasonmiller9704
     
  • SourceForge Robot

    This Tracker item was closed automatically by the system. It was
    previously set to a Pending status, and the original submitter
    did not respond within 14 days (the time period specified by
    the administrator of this Tracker).

     
  • SourceForge Robot

    • status: pending --> closed
     

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