Hello I have a raw reads file which is in the Eland format. But to run Bowtie
alignment, I need it to be in the FASTQ format. I am aware that there might
not be any conversion tools for converting Eland to FASTQ as Eland does not
contain as much information as FASTQ.
But still is there any way by which I can use the Eland raw reads in a Bowtie
aligner ? Please let me know.
I'd suggest posting this in to the Bowtie project!