#4 get_cons: save consensus/quality to disk

open
nobody
5
2005-06-20
2005-06-20
James Bonfield
No

#
# Usage:
# get_cons db_name contig_identifier ?start end?
#
# This is a simple script to output pad-stripped fasta
files in a format
# usable by cross_match as well as raw data (no headers
or newlines).
# It creates the following files:
#
# <db_name>.cons_<cotnig_name>:<start>-<to>
# <db_name>.cons_<cotnig_name>:<start>-<to>.qual
# <db_name>.cons_<cotnig_name>:<start>-<to>.raw
# <db_name>.cons_<cotnig_name>:<start>-<to>.raw.qual
#

Discussion

  • James Bonfield
    James Bonfield
    2005-06-20

     
    Attachments