Work at SourceForge, help us to make it a better place! We have an immediate need for a Support Technician in our San Francisco or Denver office.

Close

SPIN dotplot

2007-05-29
2013-04-18
  • Hello!
    A maybe simple question: When I run a "find similar span"-dotplot with SPIN, the algorithm calculates the "score" according to a matrix. Which matrix is used when comparing nucleotide sequences? Is it just 1 point per match within the window? Thanks!

    Tobias