Staden only loading first 30,100 bases of a contig

Adam Olson
2013-08-26
2013-08-26
  • Adam Olson
    Adam Olson
    2013-08-26

    Hello,

    I have installed the staden package on a linux (ubuntu) machine and have gotten to the point of loading contig files into a new database and only 30100 bases of each contig are loaded. In the loading window it says contig 2: has length 30100, but chaining right gives length 561907, and has this readout for any contig larger than 30100 bp. I made the database on a second computer and it worked fine, and loaded that database into my new staden install and that database works properly. Hoping for some help on getting the new install to work.

    Thanks
    Adam