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A different variety of read pairs

Leanne
2007-07-27
2013-04-18
  • Leanne
    Leanne
    2007-07-27

    Another question.  The sequencing project I am working on, utilizes a transposon mediated insertion/sequencing of bacs.  This means that read "pairs" are actually orientated in the opposite direction, with a 9 base pair overlap.  Can anyone come up with a way to automate the association of these?  They are obviously not the same as a conventional "read pair".