Hope you guys can help... I am installing Staden onto my mac, and it is almost up and running! However I have a problems with the gphrap. I have phred/phrap/consed/polyphred/cross-match installed and runninf under X11. I have downloaded the Extras_phrap. tar file and followed the instructions but when I type
make gcphrap I get the following error...
gcc -O2 -c -o gcphrap.o phrap.c -DGCPHRAP
/var/tmp//ccc8bgd6.s:unknown:FATAL:can't create output file: gcphrap.o
make: *** [gcphrap.o] Error 1
Any suggestions? I guess I can still use Staden with using Cap2/Cap3 instead but I 'd like to keep using Phrap.
Thanks in advance...
All this is telling me is that for some reason you cannot compile C code. It could a multitude of reasons - eg broken gcc installation, read-only filesystem, insufficient priviledges to write to the current directory, etc.