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My Linux SuSE 9.0
The mutation report command crashes gap4 when some
templates (patient DNAs) could be sequenced only single
stranded (The second strand sequence failed because of
double sequence due to InsDel mutation.).
Logged In: NO
InsDel Mutations are not reported correctly, when the second
strand sequence failed (e.g. due to mutation close to the
Logged In: YES
Is this a duplicate of Bug ID 956032? It looks it.
If I do not hear otherwise I will close this bug.
I believe that this bug has now been fixed. I managed to
reproduce some crashes in this code and solved them, so I am
assuming this is the same cause.
The fixes are in CVS and will therefore be part of 1.6.0.