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#19 Enter Tags with pads, ok in reads not in cons

v1.5.3
closed-fixed
Gap4 (50)
5
2005-04-28
2004-11-16
Anonymous
No

When entering Tags via the >Edit>Enter tags [Unpadded
tag positions = y] only the TG (read) tags are moved
according to the pads, the TC (cons) tags still count
the pads (gap4.9 and gap4.10).

What is more, I could only enter either TG or TC tags.
Both in the same file gave an error with a message
(tag.err) and gap crashed (gap4.7, gap4.9 and gap4.10).

Attached is a sample project [tag.0] after entering TC
and TG tags using Unpadded pad pos = y. You'll see the
different positions of the tags in cons and read.
The t.tags is the used file for "Enter tags". I changed
TC into TG for cons and reads tags.

Thanks, Markus

mail: mbs (at) imb-jena (dot) de
IMB Jena
Germany

Discussion

  • tag.0 tag.0.aux t.tags tag.err

     
    Attachments
  • James Bonfield
    James Bonfield
    2004-11-17

    Logged In: YES
    user_id=154581

    I can reproduce the problem and will investigate. Thanks for
    the clear description and test data.

    James

     
  • James Bonfield
    James Bonfield
    2004-11-17

    • milestone: 371884 --> v1.5.3
    • assigned_to: nobody --> jkbonfield
     
  • James Bonfield
    James Bonfield
    2005-04-28

    • status: open --> closed-fixed
     
  • James Bonfield
    James Bonfield
    2005-04-28

    Logged In: YES
    user_id=154581

    Sorry for be so slow getting back about this. I did infact
    fix the bug
    (http://cvs.sourceforge.net/viewcvs.py/staden/staden/src/gap4/tagU2.c?r1=1.4&r2=1.5)
    but forgot to comment and resolve it. Indeed I even forgot
    I'd fixed it as I started looking at the bug again!

    James